C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein D52-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000305 Tpd52l1-201 ENSMUSG00000000296 10090 - 10:31332380-31445921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000305 0.742±0.48 14.026±10.77 0.697±0.18 2.050±0.11 0.733±0.17 6.070±2.73 0.763±0.40 3.792±2.20 1.148±1.59 0.283±0.05 2.007±0.31 4.947±2.55 0.563±0.25 5.819±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OI CIL_0008OI_0002 VISTA 10:30734051-31335579
CIL_0008OD CIL_0008OD_0002 VISTA 10:30753081-31354088
CIL_0008OC CIL_0008OC_0002 VISTA 10:30928891-31529864
CIL_0008OJ CIL_0008OJ_0002 VISTA 10:30972653-31573675
CIL_000666 CIL_000666_0002 CGP 10:31313382-31445921
CIL_0002QP CIL_0002QP_0002 CGP 10:31332380-31609184

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 ISS G2/M transition of mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005769 ISA early endosome
GO:0042802 IEA identical protein binding
GO:0042803 ISS protein homodimerization activity
GO:0043281 IEA regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043406 IEA positive regulation of MAP kinase activity
GO:0046330 IEA positive regulation of JNK cascade
GO:0046982 IEA protein heterodimerization activity
GO:0048471 ISS perinuclear region of cytoplasm
GO:2001235 IEA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304877 TPD52L1-005 protein_coding Homo_sapiens 0 773
ENST00000368388 TPD52L1-004 protein_coding Homo_sapiens 0 564
ENST00000368402 TPD52L1-003 protein_coding Homo_sapiens 0 619
ENST00000392482 TPD52L1-002 protein_coding Homo_sapiens 0 459
ENST00000392483 TPD52L1-011 retained_intron Homo_sapiens 0 520
ENST00000524679 TPD52L1-009 protein_coding Homo_sapiens 0 462
ENST00000527711 TPD52L1-014 protein_coding Homo_sapiens 0 542
ENST00000528193 TPD52L1-013 protein_coding Homo_sapiens 0 684
ENST00000530868 TPD52L1-012 processed_transcript Homo_sapiens 0 392
ENST00000532429 TPD52L1-007 protein_coding Homo_sapiens 0 725
ENST00000532978 TPD52L1-006 retained_intron Homo_sapiens 0 462
ENST00000534000 TPD52L1-001 protein_coding Homo_sapiens 0 830
ENST00000534199 TPD52L1-008 protein_coding Homo_sapiens 0 459
ENST00000534368 TPD52L1-015 protein_coding Homo_sapiens 0 427

Loading