C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: perilipin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000466 Plin2-001 ENSMUSG00000028494 10090 - 4:86656565-86670060 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000466 244.658±118.86 68.170±8.60 57.137±8.55 9.261±6.64 109.201±19.95 41.356±6.06 26.736±1.54 52.968±6.20 137.787±39.10 61.350±16.42 5.406±0.89 32.028±9.13 65.154±36.43 5.905±2.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007D7 CIL_0007D7_0002 CGP 4:86578855-86670060
CIL_0007DE CIL_0007DE_0002 CGP 4:86648386-86850603

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005811 IDA lipid particle
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0014070 IEA response to organic cyclic compound
GO:0015909 IDA long-chain fatty acid transport
GO:0019915 IDA lipid storage
GO:0042493 IEA response to drug

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276914 PLIN2-007 protein_coding Homo_sapiens 0 1245
ENST00000417868 RP11-216N14.7-001 processed_pseudogene Homo_sapiens 0 889
ENST00000464326 PLIN2-004 processed_transcript Homo_sapiens 0 486
ENST00000570973 RP11-216N14.7-001 processed_pseudogene Homo_sapiens 0 889

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