C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147872-ENSG00000137145 CGP 9606 9:19108375-19373545
GeneTranscriptPositionBiotype
ENSG00000137145 (DENND4C)
DENN/MADD domain containing 4C 		ENST00000361024 (DENND4C-003) 19346556-19373545 protein_coding
ENST00000380424 (DENND4C-004) 19346728-19357695 protein_coding
ENST00000380427 (DENND4C-002) 19342669-19372880 protein_coding
ENST00000380437 (DENND4C-008) 19290758-19372594 retained_intron
ENST00000434457 (DENND4C-006) 19230435-19372598 protein_coding
ENST00000494124 (DENND4C-009) 19290758-19372594 nonsense_mediated_decay
ENST00000602442 (DENND4C-010) 19336404-19341044 retained_intron
ENST00000602708 (DENND4C-007) 19230797-19276671 retained_intron
ENST00000602925 (DENND4C-005) 19230435-19372858 protein_coding
ENSG00000147872 (PLIN2)
perilipin 2 		ENST00000276914 (PLIN2-007) 19115770-19127576 protein_coding
ENST00000380464 (PLIN2-003) 19123313-19127490 protein_coding
ENST00000380465 (PLIN2-002) 19123235-19127476 protein_coding
ENST00000434144 (PLIN2-005) 19121100-19149278 protein_coding
ENST00000464326 (PLIN2-004) 19108375-19118446 processed_transcript
ENST00000472715 (PLIN2-001) 19125633-19127490 processed_transcript
ENST00000475923 (PLIN2-008) 19125506-19127475 processed_transcript
ENST00000494753 (PLIN2-006) 19129737-19149290 processed_transcript
ENSG00000232176 (RP11-146N23.1)
 ENST00000397390 (RP11-146N23.1-001) 19200335-19201046 processed_pseudogene
ENSG00000232978 (RP11-146N23.4)
 ENST00000417577 (RP11-146N23.4-001) 19291337-19292576 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007DE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028494-ENSMUSG00000038024 CGP 10090 4:86648386-86850603
GeneTranscriptPositionBiotype
ENSMUSG00000028494 (Plin2)
perilipin 2 		ENSMUST00000000466 (Plin2-001) 86656565-86670060 protein_coding
ENSMUST00000134094 (Plin2-004) 86667665-86669986 processed_transcript
ENSMUST00000134437 (Plin2-006) 86657156-86659148 processed_transcript
ENSMUST00000138605 (Plin2-005) 86656907-86658644 processed_transcript
ENSMUST00000140382 (Plin2-002) 86661934-86669768 protein_coding
ENSMUST00000147097 (Plin2-008) 86660121-86665725 protein_coding
ENSMUST00000149700 (Plin2-003) 86661934-86669560 protein_coding
ENSMUST00000154999 (Plin2-007) 86648386-86658683 processed_transcript
ENSMUSG00000038024 (Dennd4c)
DENN/MADD domain containing 4C 		ENSMUST00000045512 (Dennd4c-201) 86748555-86830167 protein_coding
ENSMUST00000082026 (Dennd4c-001) 86748555-86850603 protein_coding
ENSMUST00000128710 (Dennd4c-002) 86777843-86781752 processed_transcript
ENSMUST00000142837 (Dennd4c-003) 86774255-86849055 protein_coding
ENSMUSG00000082969 (Gm12630)
predicted gene 12630 		ENSMUST00000121575 (Gm12630-001) 86817794-86818577 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DE_0001ENSG00000137145ENST00000361024ENST00000380424ENST00000380427ENST00000380437ENST00000434457ENST00000494124ENST00000602442ENST00000602708ENST00000602925ENSG00000147872ENST00000276914ENST00000380464ENST00000380465ENST00000434144ENST00000464326ENST00000472715ENST00000475923ENST00000494753ENSG00000232176ENST00000397390ENSG00000232978ENST00000417577CIL_0007DE_0002ENSMUSG00000028494ENSMUST00000000466ENSMUST00000134094ENSMUST00000134437ENSMUST00000138605ENSMUST00000140382ENSMUST00000147097ENSMUST00000149700ENSMUST00000154999ENSMUSG00000038024ENSMUST00000045512ENSMUST00000082026ENSMUST00000128710ENSMUST00000142837ENSMUSG00000082969ENSMUST00000121575
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DE_0001ENSG00000137145ENST00000361024ENST00000380427ENST00000380437ENST00000434457ENST00000494124ENST00000602925ENSG00000147872ENST00000276914ENST00000464326ENSG00000232176ENST00000397390ENSG00000232978ENST00000417577CIL_0007DE_0002ENSMUSG00000028494ENSMUST00000000466ENSMUST00000134437ENSMUST00000140382ENSMUST00000147097ENSMUST00000149700ENSMUST00000154999ENSMUSG00000038024ENSMUST00000045512ENSMUST00000082026ENSMUST00000142837ENSMUSG00000082969ENSMUST00000121575
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137145 ENST00000361024 N/A 3.174±0.00 N/A N/A 1.415±0.00 2.462±0.00 1.809±0.00 1.289±0.00 N/A 2.817±0.00 0.886±0.00 5.663±0.66 2.391±1.52 3.393±0.81
ENST00000380424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380427 2.431±0.00 N/A N/A N/A 2.531±0.00 N/A N/A 1.789±0.00 1.105±0.00 N/A N/A 2.095±0.00 1.552±0.00 N/A
ENST00000380437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.115±0.00
ENST00000434457 N/A 1.761±0.00 2.028±0.00 N/A 7.285±0.00 7.302±0.00 0.422±0.00 0.822±0.00 3.016±0.00 N/A N/A 2.736±2.16 3.135±0.00 1.236±0.00
ENST00000494124 N/A N/A N/A N/A N/A N/A N/A 1.619±0.00 N/A N/A N/A 2.835±0.00 N/A N/A
ENST00000602442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602925 N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A 4.099±0.00 N/A 1.183±0.00 1.463±0.51 2.209±0.00 1.501±0.43
ENSG00000147872 ENST00000276914 291.321±0.00 41.459±0.00 9.021±0.00 3.662±1.86 44.144±19.66 127.368±122.67 17.889±15.75 69.994±42.59 47.191±36.21 26.268±14.97 30.174±22.09 42.908±25.01 62.912±29.24 23.176±7.77
ENST00000380464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464326 N/A N/A N/A N/A N/A 1.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232176 ENST00000397390 0.112±0.00 0.256±0.00 0.204±0.00 0.388±0.09 0.166±0.11 0.348±0.00 0.484±0.00 0.257±0.00 0.070±0.00 0.149±0.00 0.260±0.00 0.668±0.88 0.060±0.00 0.399±0.06
ENSG00000232978 ENST00000417577 0.218±0.00 N/A N/A 0.102±0.00 0.820±0.58 0.604±0.54 0.048±0.00 0.116±0.00 0.890±0.00 4.526±0.00 N/A 2.046±2.33 0.569±0.00 0.378±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028494 ENSMUST00000000466 244.658±118.86 68.170±8.60 57.137±8.55 9.261±6.64 109.201±19.95 41.356±6.06 26.736±1.54 52.968±6.20 137.787±39.10 61.350±16.42 5.406±0.89 32.028±9.13 65.154±36.43 5.905±2.52
ENSMUST00000134094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134437 N/A 53.031±6.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.785±10.05 N/A N/A
ENSMUST00000138605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.698±4.02 N/A N/A
ENSMUST00000147097 N/A N/A N/A 3.486±0.00 N/A N/A N/A N/A N/A N/A N/A 72.518±0.00 91.622±33.56 23.166±0.00
ENSMUST00000149700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.616±25.94 N/A
ENSMUST00000154999 N/A 120.294±11.30 N/A N/A 116.160±20.59 63.136±12.00 19.622±1.96 N/A 130.295±10.88 45.993±0.00 6.481±0.30 53.796±11.55 N/A 13.175±0.79
ENSMUSG00000038024 ENSMUST00000045512 N/A 1.572±0.26 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.740±0.65 N/A N/A
ENSMUST00000082026 7.213±3.59 3.991±0.69 6.925±0.07 2.272±0.83 5.021±0.52 8.432±0.29 2.562±0.75 3.217±0.31 2.494±0.52 6.206±0.76 1.800±0.57 6.106±2.29 5.161±3.33 2.999±0.46
ENSMUST00000128710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142837 1.004±0.10 N/A N/A 1.289±0.00 0.986±0.00 N/A 0.764±0.11 0.549±0.01 0.600±0.13 N/A N/A 5.683±0.00 1.608±0.73 2.897±0.00
ENSMUSG00000082969 ENSMUST00000121575 0.598±0.20 0.271±0.07 0.192±0.11 0.445±0.14 0.421±0.18 0.406±0.10 0.249±0.04 0.443±0.20 0.137±0.09 0.363±0.25 N/A 0.539±0.16 0.158±0.06 0.237±0.04

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