C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000543 Grasp-201 ENSMUSG00000000531 10090 + 15:101224207-101232755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000543 8.405±2.33 14.320±3.62 6.114±0.53 12.810±14.48 5.060±1.48 4.062±0.49 2.945±0.49 2.732±0.70 0.558±0.25 18.607±3.04 2.449±0.45 17.527±3.95 5.985±4.84 0.794±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JZ CIL_0006JZ_0002 CGP 15:101174067-101232755
CIL_0006K0 CIL_0006K0_0002 CGP 15:101224207-101274792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005641 ISO nuclear envelope lumen
GO:0005737 ISO cytoplasm
GO:0005886 IDA plasma membrane
GO:0006886 ISO intracellular protein transport
GO:0007165 IPI signal transduction
GO:0008104 IEA protein localization
GO:0030165 IEA PDZ domain binding
GO:0030306 IEA ADP-ribosylation factor binding
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293662 GRASP-001 protein_coding Homo_sapiens 0 1450
ENST00000552049 GRASP-003 protein_coding Homo_sapiens 0 891
ENST00000552508 GRASP-006 retained_intron Homo_sapiens 0 773
ENST00000552963 GRASP-002 processed_transcript Homo_sapiens 0 1155

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