C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135503-ENSG00000161835 CGP 9606 12:51951667-52015889
GeneTranscriptPositionBiotype
ENSG00000135503 (ACVR1B)
activin A receptor, type IB 		ENST00000257963 (ACVR1B-002) 51951667-51997078 protein_coding
ENST00000415850 (ACVR1B-003) 51951744-51987346 protein_coding
ENST00000426655 (ACVR1B-005) 51951702-51992341 protein_coding
ENST00000536420 (ACVR1B-006) 51951706-51976364 protein_coding
ENST00000541224 (ACVR1B-004) 51951701-51994217 protein_coding
ENST00000542485 (ACVR1B-001) 51953380-51994925 protein_coding
ENST00000563121 (ACVR1B-008) 51984035-51991992 processed_transcript
ENSG00000161835 (GRASP)
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein 		ENST00000293662 (GRASP-001) 52006940-52015864 protein_coding
ENST00000546756 (GRASP-005) 52010527-52015065 protein_coding
ENST00000547749 (GRASP-008) 52011074-52013897 processed_transcript
ENST00000548505 (GRASP-007) 52013679-52014531 retained_intron
ENST00000550809 (GRASP-004) 52010911-52011351 retained_intron
ENST00000552049 (GRASP-003) 52010521-52015887 protein_coding
ENST00000552508 (GRASP-006) 52013496-52015182 retained_intron
ENST00000552963 (GRASP-002) 52009188-52015889 processed_transcript
ENSG00000206992 (RNU6-574P)
RNA, U6 small nuclear 574, pseudogene 		ENST00000384265 (RNU6-574P-201) 51987657-51987763 snRNA
CIL_0006JZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000532-ENSMUSG00000000531 CGP 10090 15:101174067-101232755
GeneTranscriptPositionBiotype
ENSMUSG00000000531 (Grasp)
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein 		ENSMUST00000000543 (Grasp-201) 101224207-101232755 protein_coding
ENSMUSG00000000532 (Acvr1b)
activin A receptor, type 1B 		ENSMUST00000000544 (Acvr1b-001) 101174067-101213679 protein_coding
ENSMUSG00000097915 (A330009N23Rik)
RIKEN cDNA A330009N23 gene 		ENSMUST00000180639 (A330009N23Rik-201) 101221196-101224121 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JZ_0001ENSG00000135503ENST00000257963ENST00000415850ENST00000426655ENST00000536420ENST00000541224ENST00000542485ENST00000563121ENSG00000161835ENST00000293662ENST00000546756ENST00000547749ENST00000548505ENST00000550809ENST00000552049ENST00000552508ENST00000552963ENSG00000206992ENST00000384265CIL_0006JZ_0002ENSMUSG00000000531ENSMUST00000000543ENSMUSG00000000532ENSMUST00000000544ENSMUSG00000097915ENSMUST00000180639
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JZ_0001ENSG00000135503ENST00000257963ENST00000415850ENST00000426655ENST00000536420ENST00000541224ENST00000542485ENSG00000161835ENST00000293662ENST00000546756ENST00000548505ENST00000552508ENST00000552963ENSG00000206992ENST00000384265CIL_0006JZ_0002ENSMUSG00000000531ENSMUST00000000543ENSMUSG00000000532ENSMUST00000000544ENSMUSG00000097915ENSMUST00000180639
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135503 ENST00000257963 7.427±0.00 4.697±0.00 N/A 10.910±7.02 6.605±0.00 4.234±2.04 2.067±0.00 13.254±12.56 2.778±1.78 3.425±2.78 5.719±0.00 8.641±1.88 4.657±0.57 11.525±3.01
ENST00000415850 N/A N/A N/A N/A N/A N/A N/A 1.053±0.00 1.187±0.00 1.309±0.00 N/A 1.817±0.00 N/A N/A
ENST00000426655 N/A N/A N/A N/A N/A N/A N/A 1.568±0.00 N/A N/A 2.120±0.00 N/A N/A N/A
ENST00000536420 N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541224 N/A N/A N/A N/A N/A N/A N/A 1.348±0.00 N/A N/A N/A 2.511±0.00 N/A N/A
ENST00000542485 N/A N/A N/A N/A 1.651±0.00 N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000563121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161835 ENST00000293662 20.699±0.00 11.056±0.00 N/A 7.120±4.21 7.478±5.53 9.918±0.00 6.788±5.99 11.352±0.00 10.269±0.00 83.782±0.00 6.667±5.75 7.129±4.35 6.129±0.48 7.892±0.00
ENST00000546756 N/A N/A N/A N/A N/A N/A 6.291±0.00 2.378±0.00 1.743±0.00 N/A 3.769±0.00 4.622±0.00 19.853±0.00 4.009±0.00
ENST00000547749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548505 N/A N/A 0.445±0.00 N/A N/A N/A N/A N/A 1.278±0.00 N/A N/A N/A N/A N/A
ENST00000550809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552508 N/A N/A N/A 2.112±0.00 2.880±0.00 N/A N/A N/A 0.511±0.00 N/A N/A 3.865±0.00 N/A 2.963±0.00
ENST00000552963 6.550±0.00 14.016±0.00 N/A 5.009±4.09 N/A 1.821±0.00 N/A 8.294±0.00 2.872±0.00 2.533±0.00 N/A 9.882±5.63 16.437±3.26 N/A
ENSG00000206992 ENST00000384265 N/A N/A N/A 0.622±0.00 N/A N/A N/A N/A 52.173±0.00 0.748±0.00 N/A 2.379±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000531 ENSMUST00000000543 8.405±2.33 14.320±3.62 6.114±0.53 12.810±14.48 5.060±1.48 4.062±0.49 2.945±0.49 2.732±0.70 0.558±0.25 18.607±3.04 2.449±0.45 17.527±3.95 5.985±4.84 0.794±0.19
ENSMUSG00000000532 ENSMUST00000000544 11.152±0.77 7.034±0.68 12.089±3.32 17.772±5.53 15.092±2.29 44.126±5.76 6.666±0.64 16.706±3.46 4.117±1.12 29.758±0.21 15.002±5.33 12.750±4.50 5.815±1.59 7.082±2.82
ENSMUSG00000097915 ENSMUST00000180639 1.956±0.73 1.123±0.16 1.013±0.00 1.722±1.27 0.648±0.36 0.434±0.07 1.151±0.07 1.258±0.21 0.259±0.12 4.230±0.13 0.589±0.17 1.229±0.28 0.630±0.29 0.114±0.06

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