C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001419 Zmat2-201 ENSMUSG00000001383 10090 + 18:36793923-36799660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001419
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001419 11.343±1.75 9.583±2.42 14.872±4.60 29.919±13.82 12.281±3.75 7.386±1.53 7.334±0.28 11.896±1.17 12.514±8.79 11.073±1.64 13.063±4.81 14.852±6.99 22.930±11.01 11.641±3.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZQ CIL_0006ZQ_0002 CGP 18:36783008-36799660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274712 ZMAT2-001 protein_coding Homo_sapiens 0 1327
ENST00000506644 ZMAT2-003 nonsense_mediated_decay Homo_sapiens 0 865
ENST00000519913 ZMAT2-002 protein_coding Homo_sapiens 0 473

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