C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor RNA polymerase II 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001583 Ell2-201 ENSMUSG00000001542 10090 + 13:75707484-75772356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001583
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001583 4.671±2.08 2.886±2.26 2.627±0.28 1.382±1.33 3.160±0.64 6.045±1.53 2.173±0.31 5.637±0.61 19.524±13.48 3.897±0.74 3.909±0.58 3.300±1.93 5.918±1.98 11.492±4.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002O CIL_00002O_0002 CGP 13:75089826-75772356
CIL_00002P CIL_00002P_0002 CGP 13:75707484-75850151

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006368 IEA transcription elongation from RNA polymerase II promoter
GO:0008023 ISS transcription elongation factor complex
GO:0042795 ISS snRNA transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237853 ELL2-001 protein_coding Homo_sapiens 0 3181
ENST00000413990 ELL2P1-001 processed_pseudogene Homo_sapiens 0 2231
ENST00000457883 ELL2P3-001 processed_pseudogene Homo_sapiens 0 241
ENST00000506628 ELL2-006 processed_transcript Homo_sapiens 0 383
ENST00000508694 ELL2-007 retained_intron Homo_sapiens 0 436
ENST00000508757 ELL2-010 protein_coding Homo_sapiens 0 361
ENST00000513343 ELL2-005 protein_coding Homo_sapiens 0 473
ENST00000515020 ELL2-004 retained_intron Homo_sapiens 0 374

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