C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00002O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002600-ENSDARG00000006251 CGP 7955 21:10108839-10198973
GeneTranscriptPositionBiotype
ENSDARG00000002600 (pcsk1)
proprotein convertase subtilisin/kexin type 1
ENSDART00000014668 (pcsk1-201) 10109018-10146283 protein_coding
ENSDART00000147473 (pcsk1-001) 10108839-10146352 protein_coding
CIL_00002O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021587-ENSMUSG00000001542 CGP 10090 13:75089826-75772356
GeneTranscriptPositionBiotype
ENSMUSG00000001542 (Ell2)
elongation factor RNA polymerase II 2
ENSMUST00000001583 (Ell2-201) 75707484-75772356 protein_coding
ENSMUSG00000021587 (Pcsk1)
proprotein convertase subtilisin/kexin type 1
ENSMUST00000022075 (Pcsk1-001) 75089826-75132498 protein_coding
ENSMUST00000135349 (Pcsk1-002) 75089916-75106603 retained_intron
ENSMUSG00000074800 (Gm4149)
predicted pseudogene 4149
ENSMUST00000099371 (Gm4149-201) 75644864-75645226 pseudogene
ENSMUSG00000076236 (Mir682)
microRNA 682
ENSMUST00000102281 (Mir682-201) 75645046-75645141 miRNA
ENSMUSG00000077449 (Gm23127)
predicted gene, 23127
ENSMUST00000104261 (Gm23127-201) 75768068-75768197 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002O_0001ENSDARG00000002600ENSDART00000014668ENSDART00000147473CIL_00002O_0002ENSMUSG00000001542ENSMUST00000001583ENSMUSG00000021587ENSMUST00000022075ENSMUST00000135349ENSMUSG00000074800ENSMUST00000099371ENSMUSG00000076236ENSMUST00000102281ENSMUSG00000077449ENSMUST00000104261
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002O_0001ENSDARG00000002600ENSDART00000014668ENSDART00000147473CIL_00002O_0002ENSMUSG00000001542ENSMUST00000001583ENSMUSG00000021587ENSMUST00000022075ENSMUST00000135349ENSMUSG00000074800ENSMUST00000099371ENSMUSG00000076236ENSMUST00000102281ENSMUSG00000077449ENSMUST00000104261
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002600 ENSDART00000014668 N/A N/A N/A 17.122±0.00 N/A N/A 0.047±0.00 0.187±0.00 N/A N/A 0.836±0.00 N/A N/A N/A
ENSDART00000147473 N/A N/A N/A 2.843±3.07 N/A N/A N/A 0.097±0.00 0.027±0.00 N/A 1.154±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001542 ENSMUST00000001583 4.671±2.08 2.886±2.26 2.627±0.28 1.382±1.33 3.160±0.64 6.045±1.53 2.173±0.31 5.637±0.61 19.524±13.48 3.897±0.74 3.909±0.58 3.300±1.93 5.918±1.98 11.492±4.74
ENSMUSG00000021587 ENSMUST00000022075 0.075±0.05 3.912±0.33 0.042±0.00 4.024±3.70 0.059±0.04 3.497±0.40 0.031±0.01 0.015±0.00 0.003±0.00 0.237±0.14 0.050±0.03 0.090±0.03 0.014±0.01 0.094±0.04
ENSMUST00000135349 N/A N/A N/A N/A 0.158±0.05 N/A 0.038±0.01 0.102±0.09 N/A N/A N/A N/A N/A N/A
ENSMUSG00000074800 ENSMUST00000099371 3.530±0.34 0.227±0.00 25.434±24.74 2.181±1.59 1.472±0.90 0.681±0.45 0.671±0.44 0.723±0.70 4.014±6.87 0.776±0.42 N/A 3.618±2.42 4.648±5.63 1.078±0.39
ENSMUSG00000076236 ENSMUST00000102281 N/A N/A N/A 147.854±0.00 N/A N/A N/A N/A N/A N/A N/A 1297.980±0.00 1066.152±532.75 170.757±0.00
ENSMUSG00000077449 ENSMUST00000104261 N/A N/A N/A 12.101±0.00 N/A N/A N/A N/A 16.593±8.91 N/A N/A N/A 4.885±1.81 N/A

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