C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001989 Uba1-002 ENSMUSG00000001924 10090 + X:20662898-20683179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001989 41.820±5.62 60.674±8.11 33.547±1.19 88.900±51.91 38.559±7.77 47.232±4.78 27.072±5.39 38.048±2.95 35.331±9.14 41.165±5.27 10.138±2.62 63.947±13.16 39.494±24.58 8.150±3.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G9 CIL_0005G9_0002 CGP X:20617503-20683179
CIL_0005G8 CIL_0005G8_0002 CGP X:20658326-20699880

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000792 IEA heterochromatin
GO:0004839 IBA ubiquitin activating enzyme activity
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005829 IBA cytosol
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0010008 IEA endosome membrane
GO:0016567 IBA protein ubiquitination
GO:0019941 IBA modification-dependent protein catabolic process
GO:0030057 IEA desmosome
GO:0030867 IEA rough endoplasmic reticulum membrane
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133131 uba1-003 protein_coding Danio_rerio 2e-40 172
ENSDART00000147382 uba1-002 protein_coding Danio_rerio 7e-20 104
ENSDART00000136021 uba1-004 retained_intron Danio_rerio 0.0000000002 73
ENST00000335972 UBA1-001 protein_coding Homo_sapiens 0 4241
ENST00000377269 UBA1-003 protein_coding Homo_sapiens 0 1709
ENST00000377351 UBA1-002 protein_coding Homo_sapiens 0 4041
ENST00000412206 UBA1-004 protein_coding Homo_sapiens 0 1062
ENST00000427561 UBA1-005 protein_coding Homo_sapiens 0 643
ENST00000442035 UBA1-007 protein_coding Homo_sapiens 0 1062
ENST00000451702 UBA1-008 protein_coding Homo_sapiens 0 732
ENST00000457753 UBA1-006 protein_coding Homo_sapiens 0 590
ENST00000490869 UBA1-009 processed_transcript Homo_sapiens 0 532

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