C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2 binding component 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002152 Bbc3-001 ENSMUSG00000002083 10090 + 7:16309616-16318205 protein_coding

Mus musculus EnsemblGRCm38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002152
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002152 2.471±0.54 4.381±1.24 1.795±0.17 5.408±0.45 4.873±2.52 4.932±0.86 0.583±0.14 1.009±0.47 2.838±0.93 6.442±1.47 0.522±0.15 3.483±1.14 2.745±2.15 0.757±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001836 ISS release of cytochrome c from mitochondria
GO:0005515 IPI protein binding
GO:0005739 ISS mitochondrion
GO:0005740 ISO mitochondrial envelope
GO:0006919 ISS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006974 IGI cellular response to DNA damage stimulus
GO:0008340 IGI determination of adult lifespan
GO:0030308 ISO negative regulation of cell growth
GO:0034976 IDA response to endoplasmic reticulum stress
GO:0042771 IMP intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043065 IMP positive regulation of apoptotic process
GO:0043525 IMP positive regulation of neuron apoptotic process
GO:0045926 ISS negative regulation of growth
GO:0070059 IMP intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070245 IGI positive regulation of thymocyte apoptotic process
GO:0071479 IGI cellular response to ionizing radiation
GO:0072332 ISO intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097190 ISO apoptotic signaling pathway
GO:0097194 ISS execution phase of apoptosis
GO:1900740 IMP positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway
GO:1901998 IMP toxin transport
GO:2001056 IMP positive regulation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300880 BBC3-005 protein_coding Homo_sapiens 0 1190
ENST00000341983 BBC3-002 protein_coding Homo_sapiens 0 1421
ENST00000439096 BBC3-003 protein_coding Homo_sapiens 0 1879
ENST00000449228 BBC3-001 protein_coding Homo_sapiens 0 1805
ENST00000598636 BBC3-006 retained_intron Homo_sapiens 0 540
ENST00000601438 BBC3-004 retained_intron Homo_sapiens 0 1190

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