C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmegin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002259 Clgn-001 ENSMUSG00000002190 10090 + 8:83389867-83428552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002259 0.010±0.00 0.089±0.00 0.015±0.01 1.485±0.34 0.019±0.01 0.090±0.04 0.043±0.02 0.028±0.02 0.056±0.02 0.021±0.00 0.005±0.00 0.023±0.00 0.029±0.02 60.055±5.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0006461 IMP protein complex assembly
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007338 IGI single fertilization
GO:0007339 IMP binding of sperm to zona pellucida
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0044183 IMP protein binding involved in protein folding
GO:0051082 IEA unfolded protein binding
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325617 CLGN-001 protein_coding Homo_sapiens 0 1616
ENST00000414773 CLGN-201 protein_coding Homo_sapiens 0 1555
ENST00000509477 CLGN-004 protein_coding Homo_sapiens 0 562

Loading