C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmegin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325617 CLGN-001 ENSG00000153132 9606 - 4:140388455-140427968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENST00000325617
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000325617 0.259±0.00 1.434±0.56 0.560±0.00 13.636±6.54 1.624±1.59 0.523±0.00 0.542±0.49 0.165±0.11 38.807±26.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MV CIL_0006MV_0002 CGP 4:140257286-140427968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005635 IEA nuclear envelope
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0006461 IEA protein complex assembly
GO:0007338 TAS single fertilization
GO:0007339 IEA binding of sperm to zona pellucida
GO:0016021 IEA integral component of membrane
GO:0044183 IEA protein binding involved in protein folding
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002259 Clgn-001 protein_coding Mus_musculus 0 1616
ENSMUST00000109831 Clgn-002 protein_coding Mus_musculus 0 1555

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