C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 161A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002413 Tmem161a-001 ENSMUSG00000002342 10090 + 8:70172405-70183681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000002413
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000002413 4.556±0.47 3.428±0.06 2.527±0.00 4.963±0.73 4.379±0.46 5.864±0.62 4.366±0.76 2.949±0.79 6.142±1.15 4.322±1.05 7.530±1.79 0.758±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BD CIL_0006BD_0002 CGP 8:70152778-70183681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane
GO:0032526 IEA response to retinoic acid
GO:0034599 IEA cellular response to oxidative stress
GO:0034644 IEA cellular response to UV
GO:0045739 IEA positive regulation of DNA repair
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000162044 TMEM161A-004 protein_coding Homo_sapiens 0 1325
ENST00000450333 TMEM161A-002 protein_coding Homo_sapiens 0 704
ENST00000587406 TMEM161A-001 retained_intron Homo_sapiens 0 536
ENST00000587583 TMEM161A-006 protein_coding Homo_sapiens 0 941
ENST00000587925 TMEM161A-012 protein_coding Homo_sapiens 0 200
ENST00000587985 TMEM161A-019 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000589448 TMEM161A-003 retained_intron Homo_sapiens 0 1026

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