C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 161A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002342 Tmem161a 10090 + 8:70172356-70183681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002413 Tmem161a-001 70172405-70183681 protein_coding
  ENSMUST00000123923 Tmem161a-008 70172416-70177428 processed_transcript
  ENSMUST00000125755 Tmem161a-004 70172356-70180930 processed_transcript
  ENSMUST00000125906 Tmem161a-010 70177490-70181212 nonsense_mediated_decay
  ENSMUST00000126268 Tmem161a-007 70176845-70177561 retained_intron
  ENSMUST00000133084 Tmem161a-006 70178733-70181313 retained_intron
  ENSMUST00000133339 Tmem161a-009 70172416-70177155 retained_intron
  ENSMUST00000143543 Tmem161a-005 70180539-70182032 retained_intron
  ENSMUST00000147656 Tmem161a-002 70172413-70182875 nonsense_mediated_decay
  ENSMUST00000149105 Tmem161a-003 70174303-70182867 protein_coding
  ENSMUST00000182365 Tmem161a-014 70172419-70180738 protein_coding
  ENSMUST00000182715 Tmem161a-012 70172405-70183667 nonsense_mediated_decay
  ENSMUST00000182942 Tmem161a-013 70177240-70178890 processed_transcript
  ENSMUST00000182980 Tmem161a-011 70172408-70182850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002413ENSMUST00000143543ENSMUST00000147656ENSMUST00000149105ENSMUST00000182365ENSMUST00000182715ENSMUST00000182980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002413 4.556±0.47 N/A 3.428±0.06 2.527±0.00 4.963±0.73 4.379±0.46 5.864±0.62 4.366±0.76 2.949±0.79 6.142±1.15 4.322±1.05 7.530±1.79 N/A 0.758±0.04
ENSMUST00000143543 N/A N/A N/A 10.346±1.40 N/A 20.296±4.72 N/A N/A 5.107±0.19 N/A N/A 14.655±0.00 N/A N/A
ENSMUST00000147656 4.889±0.00 N/A 4.411±0.00 6.784±0.00 N/A N/A N/A N/A 6.587±0.93 N/A 6.345±1.60 8.093±1.69 N/A 1.270±0.00
ENSMUST00000149105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.647±0.24 N/A 3.679±0.00 N/A
ENSMUST00000182365 N/A N/A N/A N/A N/A N/A N/A N/A 29.235±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.00
ENSMUST00000182980 22.072±5.92 53.991±11.71 13.752±0.39 10.175±1.62 20.159±6.66 17.368±4.37 20.583±5.38 18.670±2.98 11.194±5.15 19.502±6.16 13.976±2.14 21.030±9.60 15.099±2.44 1.738±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BD CIL_0006BD_0002 CGP 8:70152778-70183681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane
GO:0032526 IEA response to retinoic acid
GO:0034599 IEA cellular response to oxidative stress
GO:0034644 IEA cellular response to UV
GO:0045739 IEA positive regulation of DNA repair
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012790 tmem161a transmembrane protein 161A protein_coding Danio_rerio
ENSG00000064545 TMEM161A transmembrane protein 161A protein_coding Homo_sapiens

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