C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase-like transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002502 Hltf-001 ENSMUSG00000002428 10090 + 3:20057811-20118490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002502 1.235±0.52 2.156±0.49 3.757±0.41 3.720±0.31 0.761±0.25 1.562±1.09 1.122±0.26 1.301±0.51 1.587±0.92 2.452±0.96 0.419±0.16 2.951±1.97 4.021±0.75 0.513±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089F CIL_00089F_0002 VISTA 3:19844419-20446014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IDA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0016568 IEA chromatin modification
GO:0016874 IEA ligase activity
GO:0016887 IDA ATPase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310053 HLTF-003 protein_coding Homo_sapiens 0 3284
ENST00000392912 HLTF-004 protein_coding Homo_sapiens 0 3208
ENST00000465259 HLTF-002 protein_coding Homo_sapiens 0 3291
ENST00000467858 HLTF-007 protein_coding Homo_sapiens 0 1520
ENST00000493881 HLTF-006 processed_transcript Homo_sapiens 1e-34 150
ENST00000494055 HLTF-001 protein_coding Homo_sapiens 0 3208

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