C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002533 Rgs20-002 ENSMUSG00000002459 10090 - 1:4909576-5019539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002533 0.038±0.02 0.105±0.07 0.046±0.00 5.235±1.85 0.330±0.10 0.102±0.03 0.055±0.02 0.032±0.01 0.028±0.01 0.062±0.04 0.024±0.00 0.410±0.20 0.019±0.02 0.058±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053U CIL_00053U_0002 CGP 1:4909576-5162549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005794 TAS Golgi apparatus
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000056735 rgs20-001 protein_coding Danio_rerio 0 228
ENSDART00000124666 rgs20-201 protein_coding Danio_rerio 0 215
ENSDART00000131230 rgs20-002 protein_coding Danio_rerio 0 215
ENSDART00000147355 rgs20-003 protein_coding Danio_rerio 0.000000004 68

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