C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: queuine tRNA-ribosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002902 Qtrt1-201 ENSMUSG00000002825 10090 + 9:21411837-21420277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002902 11.226±5.73 11.336±1.16 11.474±1.61 12.915±7.81 16.065±1.86 17.253±3.02 5.060±1.29 7.062±0.72 9.966±6.70 8.513±1.40 1.892±0.67 19.107±6.06 8.628±3.69 7.153±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S9 CIL_0002S9_0002 CGP 9:21368019-21420277
CIL_00076W CIL_00076W_0003 CGP 9:21411837-21507759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0008479 IDA queuine tRNA-ribosyltransferase activity
GO:0008616 IEA queuosine biosynthetic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250237 QTRT1-001 protein_coding Homo_sapiens 0 1162
ENST00000421333 QTRT1-003 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000585885 QTRT1-010 processed_transcript Homo_sapiens 0 518
ENST00000587599 QTRT1-008 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000587861 QTRT1-005 retained_intron Homo_sapiens 0 394
ENST00000589488 QTRT1-002 retained_intron Homo_sapiens 0 778
ENST00000590705 QTRT1-006 retained_intron Homo_sapiens 0 420
ENST00000592376 QTRT1-011 protein_coding Homo_sapiens 0 346

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