C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiomorphic adenoma gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003369 Plag1-001 ENSMUSG00000003282 10090 - 4:3900996-3938382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003369
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003369 0.098±0.03 0.103±0.00 0.470±0.28 0.187±0.06 0.180±0.05 0.222±0.11 0.078±0.04 0.189±0.03 0.052±0.03 0.496±0.21 0.067±0.02 0.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TV CIL_0001TV_0002 CGP 4:3870657-3938423
CIL_0002RL CIL_0002RL_0002 CGP 4:3900996-3951046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005634 IBA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0010628 IDA positive regulation of gene expression
GO:0010629 IDA negative regulation of gene expression
GO:0022612 IMP gland morphogenesis
GO:0035264 IMP multicellular organism growth
GO:0035265 IMP organ growth
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0060252 IDA positive regulation of glial cell proliferation
GO:0060736 IMP prostate gland growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316981 PLAG1-003 protein_coding Homo_sapiens 0 2560
ENST00000423799 PLAG1-002 protein_coding Homo_sapiens 0 1635
ENST00000429357 PLAG1-001 protein_coding Homo_sapiens 0 2302
ENST00000519027 PLAG1-005 processed_transcript Homo_sapiens 0 298
ENST00000522009 PLAG1-004 retained_intron Homo_sapiens 0 2385

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