C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiomorphic adenoma gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429357 PLAG1-001 ENSG00000181690 9606 - 8:56166243-56211300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000429357
Transcript ID Testis
ENST00000429357 0.703±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TV CIL_0001TV_0001 CGP 8:56112942-56211324
CIL_0002RL CIL_0002RL_0001 CGP 8:56160904-56218798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003369 Plag1-001 protein_coding Mus_musculus 0 2302
ENSMUST00000151543 Plag1-003 nonsense_mediated_decay Mus_musculus 0 575
ENSMUST00000147035 Plag1-002 retained_intron Mus_musculus 0 318
ENSMUST00000137439 Plag1-004 nonsense_mediated_decay Mus_musculus 0 318

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