C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003621 Dgcr14-201 ENSMUSG00000003527 10090 - 16:17900711-17911348 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003621 5.380±1.08 10.232±1.74 3.173±0.18 9.709±1.67 6.196±3.70 7.305±0.87 2.625±0.96 4.563±0.88 3.070±1.25 5.864±1.66 2.453±0.34 10.126±2.64 5.154±1.47 8.103±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0007399 IEP nervous system development
GO:0008380 IEA RNA splicing
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086335 dgcr14-201 protein_coding Danio_rerio 6e-39 167
ENSDART00000132976 dgcr14-001 protein_coding Danio_rerio 6e-39 167
ENST00000252137 DGCR14-001 protein_coding Homo_sapiens 0 1567
ENST00000434568 DGCR14-002 nonsense_mediated_decay Homo_sapiens 0 843
ENST00000472073 DGCR14-003 retained_intron Homo_sapiens 0 1485

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