C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gene rich cluster, C10 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004389 Grcc10-001 ENSMUSG00000072772 10090 - 6:124739183-124741374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004389 118.282±35.91 175.262±20.56 107.432±15.16 202.934±34.89 146.491±13.95 123.825±16.02 126.274±14.77 208.505±10.67 73.874±29.22 130.615±10.71 41.476±7.43 185.027±20.90 46.045±20.76 95.604±45.92

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229281 C12orf57-001 protein_coding Homo_sapiens 0 490
ENST00000269280 NLRP1-010 protein_coding Homo_sapiens 0.00003 57
ENST00000420890 CCDC141-201 protein_coding Homo_sapiens 0.0000000001 75
ENST00000538392 C12orf57-002 retained_intron Homo_sapiens 0 228
ENST00000540506 C12orf57-005 protein_coding Homo_sapiens 0 433
ENST00000542222 C12orf57-007 processed_transcript Homo_sapiens 0 435
ENST00000544681 C12orf57-004 protein_coding Homo_sapiens 0 283
ENST00000545581 C12orf57-003 protein_coding Homo_sapiens 0 468
ENST00000571451 NLRP1-008 nonsense_mediated_decay Homo_sapiens 0.00003 57

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