C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: somatostatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004480 Sst-201 ENSMUSG00000004366 10090 - 16:23889581-23890844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000004480
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000004480 0.064±0.00 0.245±0.08 0.075±0.00 129.158±52.92 0.121±0.06 39.726±3.67 0.062±0.00 0.310±0.23 0.096±0.03 0.236±0.17 0.125±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000046 CIL_000046_0002 CGP 16:23609919-23890844
CIL_000045 CIL_000045_0002 CGP 16:23889581-23930787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001101 IEA response to acid
GO:0005179 IEA hormone activity
GO:0005615 IEA extracellular space
GO:0006972 IEA hyperosmotic response
GO:0009408 IEA response to heat
GO:0010243 IEA response to organonitrogen compound
GO:0030334 IDA regulation of cell migration
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0043200 IEA response to amino acid
GO:0048545 IEA response to steroid hormone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287641 SST-001 protein_coding Homo_sapiens 0 597

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