C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: somatostatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287641 SST-001 ENSG00000157005 9606 - 3:187668906-187670399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000287641
Transcript ID Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000287641 27.106±1.90 3.014±0.87 0.274±0.00 0.117±0.00 0.105±0.00 0.192±0.00 0.444±0.08 0.709±0.46 0.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000046 CIL_000046_0001 CGP 3:187368332-187670399
CIL_000045 CIL_000045_0001 CGP 3:187668906-187702557

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001101 IEA response to acid
GO:0005179 TAS:IEA hormone activity
GO:0005576 TAS:IEA extracellular region
GO:0005615 TAS extracellular space
GO:0006972 IEA hyperosmotic response
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007268 TAS synaptic transmission
GO:0007584 TAS response to nutrient
GO:0007586 TAS digestion
GO:0008285 TAS negative regulation of cell proliferation
GO:0008628 TAS hormone-mediated apoptotic signaling pathway
GO:0009408 IEA response to heat
GO:0010243 IEA response to organonitrogen compound
GO:0030334 IEA regulation of cell migration
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0043200 IEA response to amino acid
GO:0048545 IEA response to steroid hormone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004480 Sst-201 protein_coding Mus_musculus 0 597

Loading