C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005234 Wdr1-201 ENSMUSG00000005103 10090 - 5:38526814-38561666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005234 66.020±7.92 39.307±3.73 117.598±8.94 34.887±9.79 66.068±7.66 108.633±10.76 42.298±3.10 45.587±6.03 27.359±10.53 61.854±1.24 14.465±1.83 78.720±16.33 124.731±24.43 14.078±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514
CIL_0001XG CIL_0001XG_0002 CGP 5:38526814-38684826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISA actin binding
GO:0005737 IEA cytoplasm
GO:0005884 ISO actin filament
GO:0007605 ISA sensory perception of sound
GO:0015629 ISA actin cytoskeleton
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection
GO:0048713 ISO regulation of oligodendrocyte differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264785 WDR1-013 processed_transcript Homo_sapiens 0 510
ENST00000382451 WDR1-201 protein_coding Homo_sapiens 0 1581
ENST00000382452 WDR1-202 protein_coding Homo_sapiens 0 2302
ENST00000499869 WDR1-001 protein_coding Homo_sapiens 0 2302
ENST00000502702 WDR1-002 protein_coding Homo_sapiens 0 1509
ENST00000502962 WDR1-005 processed_transcript Homo_sapiens 0 1458
ENST00000504739 WDR1-019 processed_transcript Homo_sapiens 0 555
ENST00000505543 WDR1-015 processed_transcript Homo_sapiens 0 457
ENST00000505851 WDR1-010 processed_transcript Homo_sapiens 0 651
ENST00000506246 WDR1-020 processed_transcript Homo_sapiens 0 555
ENST00000508079 WDR1-011 protein_coding Homo_sapiens 0 833
ENST00000508949 WDR1-016 processed_transcript Homo_sapiens 0 457
ENST00000509600 WDR1-009 retained_intron Homo_sapiens 0 220
ENST00000509695 WDR1-018 processed_transcript Homo_sapiens 0 261
ENST00000510848 WDR1-017 processed_transcript Homo_sapiens 0 387
ENST00000514319 WDR1-012 processed_transcript Homo_sapiens 0 364
ENST00000515018 WDR1-014 processed_transcript Homo_sapiens 0 315
ENST00000515743 WDR1-006 processed_transcript Homo_sapiens 0 1267

Loading