C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Cu++ transporting, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006742 Atp7b-001 ENSMUSG00000006567 10090 - 8:21992785-22060305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000006742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000006742 0.048±0.03 0.048±0.02 0.195±0.03 0.287±0.08 0.031±0.01 0.108±0.06 0.117±0.09 0.321±0.19 5.576±2.30 8.973±1.59 0.130±0.06 2.732±2.59 0.860±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JJ CIL_0002JJ_0002 CGP 8:21969775-22060305
CIL_0000MJ CIL_0000MJ_0002 CGP 8:21992785-22071627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004008 IDA copper-exporting ATPase activity
GO:0005507 ISS copper ion binding
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005770 ISS late endosome
GO:0005802 IDA trans-Golgi network
GO:0006825 IMP copper ion transport
GO:0006878 IMP cellular copper ion homeostasis
GO:0006882 IMP cellular zinc ion homeostasis
GO:0007595 IMP lactation
GO:0008152 IEA metabolic process
GO:0015677 IEA copper ion import
GO:0015680 IMP intracellular copper ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0016323 IEA basolateral plasma membrane
GO:0035434 IDA copper ion transmembrane transport
GO:0043682 IDA copper-transporting ATPase activity
GO:0046688 IEA response to copper ion
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051208 IEA sequestering of calcium ion
GO:0060003 IDA copper ion export

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242839 ATP7B-002 protein_coding Homo_sapiens 0 3328
ENST00000344297 ATP7B-201 protein_coding Homo_sapiens 0 1589
ENST00000400366 ATP7B-202 protein_coding Homo_sapiens 0 3314
ENST00000400370 ATP7B-203 protein_coding Homo_sapiens 0 1925
ENST00000418097 ATP7B-204 protein_coding Homo_sapiens 0 1744
ENST00000448424 ATP7B-205 protein_coding Homo_sapiens 0 2222
ENST00000466629 ATP7B-005 processed_transcript Homo_sapiens 0 446
ENST00000482841 ATP7B-003 processed_transcript Homo_sapiens 0 686
ENST00000603437 RP11-863N1.4-001 processed_pseudogene Homo_sapiens 0 388

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