C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Cu++ transporting, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000242839 ATP7B-002 ENSG00000123191 9606 - 13:51932673-52011494 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000242839
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000242839 0.740±0.00 0.100±0.00 0.265±0.00 0.150±0.00 0.381±0.00 0.159±0.00 1.772±0.00 0.448±0.00 1.436±1.23 2.851±0.99 2.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JJ CIL_0002JJ_0001 CGP 13:51861981-52011494
CIL_0000MJ CIL_0000MJ_0001 CGP 13:51932673-52029664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000166 IEA nucleotide binding
GO:0004008 NAS copper-exporting ATPase activity
GO:0005507 IDA:IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005739 IEA mitochondrion
GO:0005770 IDA late endosome
GO:0005802 IDA trans-Golgi network
GO:0005887 TAS integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0006825 IGI copper ion transport
GO:0006878 TAS cellular copper ion homeostasis
GO:0006882 IEA cellular zinc ion homeostasis
GO:0007595 IEA lactation
GO:0008152 IEA metabolic process
GO:0015677 IDA copper ion import
GO:0015680 IEA intracellular copper ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016323 IDA basolateral plasma membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0030001 IEA metal ion transport
GO:0034220 TAS ion transmembrane transport
GO:0035434 IEA copper ion transmembrane transport
GO:0043682 IEA copper-transporting ATPase activity
GO:0046688 IDA response to copper ion
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051208 IDA sequestering of calcium ion
GO:0055085 TAS transmembrane transport
GO:0060003 IEA copper ion export

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006742 Atp7b-001 protein_coding Mus_musculus 0 3328
ENSMUST00000110738 Atp7b-002 protein_coding Mus_musculus 0 3314

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