C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: titin-cap
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000008021 Tcap-001 ENSMUSG00000007877 10090 + 11:98383811-98384953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008021 0.322±0.22 0.306±0.16 3.888±0.06 2.507±3.43 106.553±138.25 0.345±0.20 602.878±173.59 7.336±7.11 0.094±0.10 47.172±12.52 2657.501±422.85 0.744±0.20 0.118±0.05 0.171±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00023N CIL_00023N_0002 CGP 11:98358368-98384953
CIL_0002BR CIL_0002BR_0002 CGP 11:98383811-98388181

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IEP somitogenesis
GO:0003009 IEA skeletal muscle contraction
GO:0003300 IEA cardiac muscle hypertrophy
GO:0005515 IPI protein binding
GO:0007512 IEP adult heart development
GO:0008307 IEA structural constituent of muscle
GO:0014898 IEA cardiac muscle hypertrophy in response to stress
GO:0030018 IDA Z disc
GO:0030240 IEA skeletal muscle thin filament assembly
GO:0030241 IEA skeletal muscle myosin thick filament assembly
GO:0030674 IEA protein binding, bridging
GO:0030916 IEP otic vesicle formation
GO:0031432 IEA titin binding
GO:0031674 IDA I band
GO:0035995 IEA detection of muscle stretch
GO:0044325 IEA ion channel binding
GO:0045214 ISA sarcomere organization
GO:0048739 IEA cardiac muscle fiber development
GO:0048769 IEA sarcomerogenesis
GO:0051373 IEA FATZ binding
GO:0055003 IEA cardiac myofibril assembly
GO:0055008 IEA cardiac muscle tissue morphogenesis
GO:0060048 IEA cardiac muscle contraction
GO:0070080 IEA titin Z domain binding

Homologs

No Homologs available.

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