C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131748-ENSG00000173991 CGP 9606 17:39637065-39666555
GeneTranscriptPositionBiotype
ENSG00000131748 (STARD3)
StAR-related lipid transfer (START) domain containing 3 		ENST00000336308 (STARD3-001) 39637065-39663484 protein_coding
ENST00000394250 (STARD3-008) 39637144-39663434 protein_coding
ENST00000443521 (STARD3-002) 39653125-39658762 protein_coding
ENST00000460894 (STARD3-005) 39653500-39658001 processed_transcript
ENST00000471896 (STARD3-007) 39658989-39663469 retained_intron
ENST00000481171 (STARD3-006) 39657911-39663484 retained_intron
ENST00000484773 (STARD3-004) 39653049-39658693 retained_intron
ENST00000488876 (STARD3-003) 39653098-39663484 retained_intron
ENST00000544210 (STARD3-012) 39637141-39663094 protein_coding
ENST00000577248 (STARD3-030) 39637147-39658458 protein_coding
ENST00000578232 (STARD3-015) 39637090-39659553 processed_transcript
ENST00000578254 (STARD3-019) 39637140-39657798 processed_transcript
ENST00000578384 (STARD3-027) 39660220-39662479 retained_intron
ENST00000578577 (STARD3-011) 39637142-39663007 nonsense_mediated_decay
ENST00000578686 (STARD3-026) 39660286-39661321 retained_intron
ENST00000579479 (STARD3-021) 39637147-39657810 protein_coding
ENST00000580331 (STARD3-017) 39652489-39657052 protein_coding
ENST00000580551 (STARD3-022) 39637139-39657887 retained_intron
ENST00000580611 (STARD3-013) 39637153-39663484 protein_coding
ENST00000581894 (STARD3-020) 39637142-39657833 protein_coding
ENST00000582874 (STARD3-024) 39653535-39658776 processed_transcript
ENST00000583419 (STARD3-018) 39652778-39658460 protein_coding
ENST00000583582 (STARD3-010) 39637142-39658819 retained_intron
ENST00000583639 (STARD3-028) 39660196-39662896 processed_transcript
ENST00000583718 (STARD3-016) 39637370-39657830 protein_coding
ENST00000583884 (STARD3-025) 39659064-39662321 nonsense_mediated_decay
ENST00000584850 (STARD3-009) 39658446-39663469 retained_intron
ENST00000585214 (STARD3-023) 39637162-39658296 processed_transcript
ENST00000585269 (STARD3-014) 39658394-39663433 retained_intron
ENSG00000173991 (TCAP)
titin-cap 		ENST00000309889 (TCAP-001) 39664187-39666555 protein_coding
ENST00000578283 (TCAP-002) 39665349-39666249 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00023N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018167-ENSMUSG00000007877 CGP 10090 11:98358368-98384953
GeneTranscriptPositionBiotype
ENSMUSG00000007877 (Tcap)
titin-cap 		ENSMUST00000008021 (Tcap-001) 98383811-98384953 protein_coding
ENSMUSG00000018167 (Stard3)
START domain containing 3 		ENSMUST00000018311 (Stard3-001) 98358368-98381099 protein_coding
ENSMUST00000130323 (Stard3-006) 98375520-98378648 processed_transcript
ENSMUST00000143243 (Stard3-007) 98378156-98379348 processed_transcript
ENSMUST00000148738 (Stard3-004) 98376447-98378229 processed_transcript
ENSMUST00000152559 (Stard3-003) 98358444-98376835 processed_transcript
ENSMUST00000154960 (Stard3-002) 98358431-98381112 processed_transcript
ENSMUST00000155063 (Stard3-005) 98358430-98376830 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023N_0001ENSG00000131748ENST00000336308ENST00000394250ENST00000481171ENST00000488876ENST00000544210ENST00000577248ENST00000578232ENST00000578577ENST00000580611ENST00000584850ENST00000585269ENSG00000173991ENST00000309889ENST00000578283CIL_00023N_0002ENSMUSG00000007877ENSMUST00000008021ENSMUSG00000018167ENSMUST00000018311ENSMUST00000143243ENSMUST00000154960ENSMUST00000155063
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131748 ENST00000336308 6.121±0.00 9.891±0.00 N/A 8.502±0.00 6.761±0.00 4.600±0.00 2.065±0.00 4.489±0.00 5.852±0.00 6.978±0.00 N/A 14.711±8.34 19.101±7.95 10.585±1.50
ENST00000394250 8.847±0.00 N/A N/A 6.669±0.00 N/A N/A 2.955±0.00 N/A 2.454±0.00 4.690±0.00 4.784±0.00 N/A N/A 4.317±0.00
ENST00000443521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481171 N/A 2.242±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488876 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.385±0.00 N/A 7.321±0.00 N/A N/A
ENST00000544210 N/A N/A N/A N/A N/A 5.738±0.00 0.221±0.00 N/A N/A 1.149±0.00 N/A 8.789±0.00 12.043±0.00 12.363±0.00
ENST00000577248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.607±0.00 N/A N/A N/A
ENST00000578232 N/A N/A 2.152±0.00 3.165±0.00 N/A N/A N/A N/A N/A N/A N/A 4.627±0.00 N/A N/A
ENST00000578254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578577 N/A N/A 1.112±0.00 1.469±0.00 N/A 1.957±0.00 2.161±1.72 N/A N/A 1.400±0.00 N/A 9.664±7.58 14.146±0.00 22.123±0.00
ENST00000578686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580611 N/A 4.483±0.00 0.356±0.00 N/A 4.502±0.00 4.029±0.00 N/A 3.657±1.01 N/A 6.153±0.00 N/A 1.408±0.00 N/A N/A
ENST00000581894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584850 N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A 3.420±0.00 N/A N/A N/A N/A
ENST00000585214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585269 N/A 6.981±0.00 N/A N/A 5.333±0.00 4.620±0.00 N/A 6.214±0.00 3.135±0.00 N/A 3.666±2.35 N/A N/A 7.291±0.00
ENSG00000173991 ENST00000309889 0.260±0.00 0.532±0.00 0.178±0.00 0.596±0.38 19.030±18.93 1.313±0.00 280.523±241.90 0.426±0.26 0.271±0.14 0.444±0.39 214.383±9.38 0.773±0.33 1.787±2.12 4.783±4.19
ENST00000578283 0.139±0.00 N/A 0.182±0.00 0.737±0.00 123.147±122.91 1.218±0.00 558.188±502.05 1.135±0.00 0.364±0.00 0.490±0.00 366.785±67.86 0.300±0.00 3.863±4.63 34.437±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007877 ENSMUST00000008021 0.322±0.22 0.306±0.16 3.888±0.06 2.507±3.43 106.553±138.25 0.345±0.20 602.878±173.59 7.336±7.11 0.094±0.10 47.172±12.52 2657.501±422.85 0.744±0.20 0.118±0.05 0.171±0.06
ENSMUSG00000018167 ENSMUST00000018311 15.485±1.29 15.496±1.87 12.364±2.78 15.347±8.97 16.675±2.69 36.660±3.13 9.278±2.74 21.664±3.30 12.240±1.09 34.355±4.81 7.208±1.07 22.788±7.32 15.055±7.66 6.737±3.54
ENSMUST00000130323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143243 10.747±0.96 11.613±0.45 N/A 15.722±9.44 16.034±2.12 33.188±3.11 8.193±1.98 N/A 6.516±0.79 24.942±3.81 N/A 18.062±6.35 5.374±0.00 N/A
ENSMUST00000148738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00
ENSMUST00000155063 N/A 10.803±3.02 N/A N/A 15.271±2.02 22.278±3.39 N/A N/A N/A N/A N/A 16.379±2.85 N/A N/A

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