C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor, family C, group 5, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000008878 Gprc5b-201 ENSMUSG00000008734 10090 - 7:118972040-118995211 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENSMUST00000008878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENSMUST00000008878 28.413±8.76 36.421±14.95 10.462±0.65 17.618±8.97 18.621±5.51 3.776±1.10 7.156±1.23 7.943±1.12 15.288±2.81 6.253±0.37 17.665±4.74 7.133±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MO CIL_0006MO_0002 CGP 7:118842222-118972652
CIL_00008S CIL_00008S_0003 CGP 7:118855760-118995211
CIL_0006MP CIL_0006MP_0002 CGP 7:118972040-119184374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IMP positive regulation of protein phosphorylation
GO:0004930 IEA G-protein coupled receptor activity
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005886 IDA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007626 IMP locomotory behavior
GO:0009986 IDA cell surface
GO:0010976 IDA positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0019901 IDA protein kinase binding
GO:0030295 IEA protein kinase activator activity
GO:0042593 IMP glucose homeostasis
GO:0043123 IGI positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045121 IDA membrane raft
GO:0045666 IMP positive regulation of neuron differentiation
GO:0045860 IMP positive regulation of protein kinase activity
GO:0050729 IMP positive regulation of inflammatory response
GO:0060907 IMP positive regulation of macrophage cytokine production
GO:0061098 IMP positive regulation of protein tyrosine kinase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300571 GPRC5B-001 protein_coding Homo_sapiens 0 1661
ENST00000308214 IQCK-003 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000320394 IQCK-001 protein_coding Homo_sapiens 0 255
ENST00000535671 GPRC5B-004 protein_coding Homo_sapiens 0 1197
ENST00000562348 GPRC5B-005 retained_intron Homo_sapiens 0 337
ENST00000562469 GPRC5B-009 protein_coding Homo_sapiens 0 510
ENST00000566822 GPRC5B-008 protein_coding Homo_sapiens 0 606
ENST00000568061 IQCK-013 protein_coding Homo_sapiens 4e-22 108
ENST00000568214 GPRC5B-010 protein_coding Homo_sapiens 0 292
ENST00000568300 IQCK-005 retained_intron Homo_sapiens 0 246
ENST00000569102 GPRC5B-011 processed_transcript Homo_sapiens 0 248
ENST00000569479 GPRC5B-002 protein_coding Homo_sapiens 0 1467
ENST00000569847 GPRC5B-003 protein_coding Homo_sapiens 0 1362
ENST00000570142 GPRC5B-007 protein_coding Homo_sapiens 0 285

Loading