C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010239 Slc3a2-201 ENSMUSG00000010095 10090 - 19:8706882-8713897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010239 37.127±9.80 70.034±0.75 33.333±0.00 17.568±4.82 35.689±10.06 23.744±4.50 7.333±0.58 146.750±32.18 29.868±13.43 75.132±23.73 4.679±1.56 82.574±18.34 113.718±83.37 10.374±3.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0015175 ISS neutral amino acid transmembrane transporter activity
GO:0015827 ISS tryptophan transport
GO:0016021 IEA integral component of membrane
GO:0043169 IEA cation binding
GO:0043330 ISO response to exogenous dsRNA
GO:0060356 ISS leucine import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338663 SLC3A2-004 protein_coding Homo_sapiens 0 1066
ENST00000377889 SLC3A2-002 protein_coding Homo_sapiens 0 1044
ENST00000377890 SLC3A2-001 protein_coding Homo_sapiens 0 1044
ENST00000377891 SLC3A2-003 protein_coding Homo_sapiens 0 1044
ENST00000535296 SLC3A2-026 protein_coding Homo_sapiens 0 1044
ENST00000538084 SLC3A2-005 protein_coding Homo_sapiens 0 435
ENST00000539458 SLC3A2-007 protein_coding Homo_sapiens 0 279
ENST00000541372 SLC3A2-021 protein_coding Homo_sapiens 0.00000000000007 81
ENST00000544377 SLC3A2-006 protein_coding Homo_sapiens 0 364

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