C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 3 (amino acid transporter heavy chain), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338663 SLC3A2-004 ENSG00000168003 9606 + 11:62880872-62888855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338663 60.183±0.00 59.448±0.00 14.069±0.00 31.195±26.07 27.231±22.24 26.021±23.07 6.643±5.45 63.332±58.97 19.620±13.46 43.546±34.63 67.435±66.36 66.033±58.48 75.460±17.71 48.201±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 IDA double-stranded RNA binding
GO:0003824 IEA catalytic activity
GO:0005432 TAS calcium:sodium antiporter activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006811 TAS ion transport
GO:0006816 NAS calcium ion transport
GO:0006865 TAS amino acid transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0009986 IDA cell surface
GO:0015175 ISS neutral amino acid transmembrane transporter activity
GO:0015827 ISS tryptophan transport
GO:0016020 IDA membrane
GO:0016021 NAS integral component of membrane
GO:0016049 NAS cell growth
GO:0030054 IDA cell junction
GO:0035725 TAS sodium ion transmembrane transport
GO:0043169 IEA cation binding
GO:0043330 IMP response to exogenous dsRNA
GO:0044822 IDA poly(A) RNA binding
GO:0050900 TAS leukocyte migration
GO:0055085 TAS transmembrane transport
GO:0060356 ISS leucine import
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010239 Slc3a2-201 protein_coding Mus_musculus 0 1066
ENSMUST00000170157 Slc3a2-202 protein_coding Mus_musculus 0 1044

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