C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence AI597479
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010434 AI597479-001 ENSMUSG00000010290 10090 + 1:43098710-43115947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010434
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010434 5.524±0.74 3.160±0.92 11.017±1.88 8.920±6.01 3.104±0.81 3.877±0.34 5.004±0.52 3.354±0.28 3.417±1.03 6.067±0.59 5.398±0.41 7.170±1.72 5.007±1.23 6.181±2.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096O CIL_00096O_0002 VISTA 1:42588323-43189246
CIL_0003Y4 CIL_0003Y4_0002 CGP 1:43047200-43115947
CIL_00010E CIL_00010E_0002 CGP 1:43098710-43196984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0048598 IEA embryonic morphogenesis
GO:0072669 ISS tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258457 C2orf49-001 protein_coding Homo_sapiens 0 782
ENST00000410049 C2orf49-002 protein_coding Homo_sapiens 0 466

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