C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010974 Kdelr3-201 ENSMUSG00000010830 10090 + 15:79516408-79527739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000010974
Transcript ID Placenta
ENSMUST00000010974 24.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0005DI CIL_0005DI_0002 CGP 15:79483718-79527739
CIL_0005DJ CIL_0005DJ_0002 CGP 15:79516408-79546741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006621 IEA protein retention in ER lumen
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0046923 IEA ER retention sequence binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216014 KDELR3-001 protein_coding Homo_sapiens 0 819
ENST00000409006 KDELR3-002 protein_coding Homo_sapiens 0 787
ENST00000471268 KDELR3-003 processed_transcript Homo_sapiens 0 649

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