C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168135-ENSG00000100196 CGP 9606 22:38426327-38483447
GeneTranscriptPositionBiotype
ENSG00000100196 (KDELR3)
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 		ENST00000216014 (KDELR3-001) 38468062-38483447 protein_coding
ENST00000409006 (KDELR3-002) 38468078-38481635 protein_coding
ENST00000471268 (KDELR3-003) 38474329-38482922 processed_transcript
ENSG00000100201 (DDX17)
DEAD (Asp-Glu-Ala-Asp) box helicase 17 		ENST00000216019 (DDX17-003) 38485681-38506294 retained_intron
ENST00000396821 (DDX17-001) 38483440-38506337 protein_coding
ENST00000403230 (DDX17-002) 38485878-38506312 protein_coding
ENST00000431312 (DDX17-011) 38485677-38488961 retained_intron
ENST00000432525 (DDX17-005) 38490313-38507660 processed_transcript
ENST00000467279 (DDX17-006) 38498553-38505901 processed_transcript
ENST00000475004 (DDX17-010) 38489177-38493771 processed_transcript
ENST00000477112 (DDX17-008) 38494310-38495046 retained_intron
ENST00000479734 (DDX17-004) 38505165-38506306 processed_transcript
ENST00000497196 (DDX17-007) 38493361-38495046 retained_intron
ENSG00000168135 (KCNJ4)
potassium inwardly-rectifying channel, subfamily J, member 4 		ENST00000303592 (KCNJ4-001) 38426327-38455199 protein_coding
CIL_0005DI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044216-ENSMUSG00000010830 CGP 10090 15:79483718-79527739
GeneTranscriptPositionBiotype
ENSMUSG00000010830 (Kdelr3)
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 		ENSMUST00000010974 (Kdelr3-201) 79516408-79527739 protein_coding
ENSMUSG00000044216 (Kcnj4)
potassium inwardly-rectifying channel, subfamily J, member 4 		ENSMUST00000057801 (Kcnj4-201) 79483718-79505241 protein_coding
ENSMUSG00000055065 (Ddx17)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 		ENSMUST00000054014 (Ddx17-201) 79527707-79546741 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DI_0001ENSG00000100196ENST00000216014ENST00000409006ENST00000471268ENSG00000100201ENST00000216019ENST00000396821ENST00000403230ENST00000431312ENST00000432525ENST00000467279ENST00000475004ENST00000477112ENST00000479734ENST00000497196ENSG00000168135ENST00000303592CIL_0005DI_0002ENSMUSG00000010830ENSMUST00000010974ENSMUSG00000044216ENSMUST00000057801ENSMUSG00000055065ENSMUST00000054014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DI_0001ENSG00000100196ENST00000216014ENSG00000100201ENST00000216019ENST00000396821ENST00000403230ENST00000432525ENSG00000168135ENST00000303592CIL_0005DI_0002ENSMUSG00000010830ENSMUST00000010974ENSMUSG00000044216ENSMUST00000057801ENSMUSG00000055065ENSMUST00000054014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100196 ENST00000216014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.725±0.00 N/A
ENST00000409006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100201 ENST00000216019 N/A N/A 12.776±0.00 N/A 8.109±0.00 10.945±0.00 N/A N/A 12.893±0.00 N/A 3.508±0.00 16.724±0.00 N/A N/A
ENST00000396821 9.675±0.00 14.022±0.00 27.513±0.00 18.714±3.09 40.112±0.82 34.679±8.54 12.908±4.69 14.573±6.70 21.433±10.15 22.035±5.78 14.602±6.19 72.707±23.44 20.478±7.61 15.906±1.51
ENST00000403230 N/A N/A N/A N/A 18.842±0.00 N/A 16.848±0.00 16.661±0.00 48.759±0.00 N/A 17.976±0.00 39.176±0.00 N/A N/A
ENST00000431312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432525 N/A N/A N/A N/A 33.927±0.00 44.747±0.00 N/A N/A N/A 57.815±0.00 N/A N/A N/A N/A
ENST00000467279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168135 ENST00000303592 N/A N/A N/A 15.242±11.91 0.063±0.00 N/A 7.089±6.77 0.041±0.00 0.070±0.00 N/A N/A 0.399±0.44 0.044±0.00 0.538±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010830 ENSMUST00000010974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.351±0.00 N/A
ENSMUSG00000044216 ENSMUST00000057801 0.070±0.04 0.961±0.82 0.034±0.02 11.883±16.56 0.038±0.02 0.044±0.02 0.061±0.04 0.027±0.01 0.007±0.00 0.014±0.00 0.035±0.00 0.116±0.07 0.039±0.01 0.258±0.13
ENSMUSG00000055065 ENSMUST00000054014 86.770±4.62 148.472±24.46 61.288±28.14 79.280±47.90 53.141±18.17 54.686±22.28 19.481±5.42 37.147±11.71 35.557±20.89 84.590±36.09 7.693±0.82 121.163±78.95 39.858±23.45 25.984±6.67

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