C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000011178 Slc5a1-001 ENSMUSG00000011034 10090 + 5:33104219-33162872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000011178
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000011178 0.326±0.31 0.040±0.03 1.226±0.23 0.031±0.01 1.142±0.32 44.608±3.27 0.106±0.07 20.338±3.88 0.134±0.11 1.521±0.22 0.014±0.00 0.221±0.16 0.526±0.50 0.050±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EV CIL_0006EV_0003 CGP 5:33018816-33162872

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IMP metanephros development
GO:0005355 IMP glucose transmembrane transporter activity
GO:0005412 IEA glucose:sodium symporter activity
GO:0005515 IEA protein binding
GO:0005903 IDA brush border
GO:0005911 IEA cell-cell junction
GO:0015758 IMP glucose transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0050892 IDA intestinal absorption
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000080449 slc5a1-001 protein_coding Danio_rerio 0 741
ENST00000266088 SLC5A1-001 protein_coding Homo_sapiens 0 2165
ENST00000477969 SLC5A1-002 retained_intron Homo_sapiens 0 904
ENST00000486394 SLC5A1-003 retained_intron Homo_sapiens 0 518
ENST00000543737 SLC5A1-201 protein_coding Homo_sapiens 0 1940

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