C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000012259 Med15-201 ENSMUSG00000012114 10090 - 16:17651221-17722930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000012259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000012259 10.032±3.35 21.251±1.22 12.807±4.65 9.629±3.58 17.805±2.30 18.928±2.30 3.663±1.18 6.743±0.49 7.669±2.50 14.776±2.53 3.079±0.69 14.002±5.72 10.009±6.81 11.629±4.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0004HX CIL_0004HX_0002 CGP 16:17646470-17722930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016020 IEA membrane
GO:0016592 IEA mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263205 MED15-004 protein_coding Homo_sapiens 0 2599
ENST00000292733 MED15-001 protein_coding Homo_sapiens 0 1452
ENST00000382974 MED15-006 protein_coding Homo_sapiens 0 1452
ENST00000406969 MED15-005 protein_coding Homo_sapiens 0 1452
ENST00000414658 MED15-010 protein_coding Homo_sapiens 0 497
ENST00000424716 MED15P9-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 359
ENST00000432052 MED15-011 protein_coding Homo_sapiens 0 230
ENST00000433831 MED15-003 nonsense_mediated_decay Homo_sapiens 0 1452
ENST00000436496 MED15-031 retained_intron Homo_sapiens 0 291
ENST00000438962 MED15-014 protein_coding Homo_sapiens 1e-20 104
ENST00000441501 MED15-013 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000444094 MED15-009 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000445189 MED15-016 protein_coding Homo_sapiens 0 440
ENST00000445987 MED15-015 protein_coding Homo_sapiens 0 420
ENST00000451058 MED15-017 protein_coding Homo_sapiens 0 374
ENST00000461076 MED15-030 retained_intron Homo_sapiens 1e-20 104
ENST00000473028 MED15-018 processed_transcript Homo_sapiens 3e-31 139
ENST00000473244 MED15-033 retained_intron Homo_sapiens 0 1452
ENST00000476187 MED15-029 retained_intron Homo_sapiens 0 344
ENST00000477824 MED15-012 processed_transcript Homo_sapiens 3e-31 139
ENST00000478831 MED15-028 processed_transcript Homo_sapiens 0 344
ENST00000486656 MED15-019 retained_intron Homo_sapiens 0 254
ENST00000489651 MED15-008 retained_intron Homo_sapiens 0 1567
ENST00000492381 MED15-007 retained_intron Homo_sapiens 0 1452
ENST00000493216 MED15-032 retained_intron Homo_sapiens 0 398

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