C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014339 Dnajc7-001 ENSMUSG00000014195 10090 - 11:100582818-100620168 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000014339
Transcript ID Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000014339 19.433±3.38 48.841±17.90 13.962±0.00 8.318±0.39 23.373±5.22 25.235±5.45 36.565±2.78 28.978±20.87 43.006±2.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KT CIL_0000KT_0003 CGP 11:100545607-100591729
CIL_0006EX CIL_0006EX_0002 CGP 11:100574904-100620168
CIL_000429 CIL_000429_0003 CGP 11:100582818-100627607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0016020 IEA membrane
GO:0031072 IEA heat shock protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:0070389 IEA chaperone cofactor-dependent protein refolding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307641 NKIRAS2-010 protein_coding Homo_sapiens 0 355
ENST00000316603 DNAJC7-003 protein_coding Homo_sapiens 0 1901
ENST00000426588 DNAJC7-005 protein_coding Homo_sapiens 0 2145
ENST00000455736 RP4-792G4.3-001 processed_pseudogene Homo_sapiens 0 1415
ENST00000457167 DNAJC7-001 protein_coding Homo_sapiens 0 2553
ENST00000585693 DNAJC7-022 retained_intron Homo_sapiens 0 460
ENST00000585866 DNAJC7-012 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000586335 DNAJC7-020 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000587727 DNAJC7-023 protein_coding Homo_sapiens 2e-26 122
ENST00000588641 DNAJC7-013 protein_coding Homo_sapiens 0 686
ENST00000588814 DNAJC7-002 nonsense_mediated_decay Homo_sapiens 0 1666
ENST00000589576 DNAJC7-014 protein_coding Homo_sapiens 0 630
ENST00000589586 DNAJC7-015 protein_coding Homo_sapiens 0 507
ENST00000589773 DNAJC7-011 protein_coding Homo_sapiens 0 501
ENST00000589810 DNAJC7-006 nonsense_mediated_decay Homo_sapiens 0 1247
ENST00000590348 DNAJC7-010 protein_coding Homo_sapiens 0 1002
ENST00000590774 DNAJC7-017 protein_coding Homo_sapiens 0 560
ENST00000590847 DNAJC7-021 retained_intron Homo_sapiens 0 272
ENST00000590886 DNAJC7-018 protein_coding Homo_sapiens 0 414
ENST00000591153 DNAJC7-019 processed_transcript Homo_sapiens 0 398
ENST00000591787 DNAJC7-009 protein_coding Homo_sapiens 0 407

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