C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin XIV
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016344 Syt14-201 ENSMUSG00000016200 10090 - 1:192897307-193035698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000016344
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000016344 0.115±0.06 0.864±0.36 0.150±0.06 0.055±0.00 0.029±0.01 0.761±0.09 0.074±0.00 0.029±0.01 0.823±0.40 0.585±0.15 0.407±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NP CIL_0008NP_0002 VISTA 1:192484315-193084989
CIL_0009DF CIL_0009DF_0002 VISTA 1:192489593-193091084
CIL_0007QS CIL_0007QS_0002 VISTA 1:192498093-193100700
CIL_0008NN CIL_0008NN_0002 VISTA 1:192506324-193107093
CIL_0008VU CIL_0008VU_0002 VISTA 1:192521976-193125952
CIL_0007SY CIL_0007SY_0002 VISTA 1:192551640-193152457
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_0001G6 CIL_0001G6_0002 CGP 1:192844431-193035698
CIL_00043H CIL_00043H_0002 CGP 1:192897307-193130251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 IDA phospholipid binding
GO:0008150 ND biological_process
GO:0016021 ISS integral component of membrane
GO:0042803 IDA protein homodimerization activity
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367015 SYT14-003 protein_coding Homo_sapiens 0 1596
ENST00000367019 SYT14-004 protein_coding Homo_sapiens 0 2218
ENST00000399639 SYT14-002 nonsense_mediated_decay Homo_sapiens 0 981
ENST00000472886 SYT14-001 protein_coding Homo_sapiens 0 1722
ENST00000481459 SYT14P1-001 transcribed_processed_pseudogene Homo_sapiens 0 318
ENST00000534859 SYT14-005 protein_coding Homo_sapiens 0 1705
ENST00000537238 SYT14-201 protein_coding Homo_sapiens 0 1596
ENST00000600441 SYT14P1-002 processed_transcript Homo_sapiens 0 320

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