C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: slowmo homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016401 Slmo2-001 ENSMUSG00000016257 10090 - 2:174465067-174473081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016401 32.202±4.05 38.556±2.93 21.829±4.03 26.566±9.41 20.409±3.20 56.089±5.47 31.341±1.77 24.907±1.28 32.572±18.00 17.888±1.47 22.878±0.90 24.275±5.14 30.601±15.34 22.394±7.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073B CIL_00073B_0002 CGP 2:174461072-174473081
CIL_000738 CIL_000738_0002 CGP 2:174465067-174710832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005758 IBA mitochondrial intermembrane space
GO:0015914 IBA phospholipid transport
GO:1990050 IBA phosphatidic acid transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355937 SLMO2-002 protein_coding Homo_sapiens 0 701
ENST00000371033 SLMO2-001 protein_coding Homo_sapiens 0 291
ENST00000414230 SLMO2P11-001 processed_pseudogene Homo_sapiens 0 329
ENST00000431957 SLMO2-ATP5E-001 processed_pseudogene Homo_sapiens 0 549
ENST00000457142 SLMO2P1-001 processed_pseudogene Homo_sapiens 0 396
ENST00000463057 SLMO2-004 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000466051 SLMO2-003 retained_intron Homo_sapiens 0 294
ENST00000515476 CTD-2325A15.2-001 processed_pseudogene Homo_sapiens 0 292

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