C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: slowmo homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355937 SLMO2-002 ENSG00000101166 9606 - 20:59033145-59042909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355937
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355937 15.091±0.00 12.641±0.00 1.256±0.00 6.127±2.75 8.971±3.46 8.663±1.15 5.752±2.99 6.696±5.63 4.555±2.27 6.383±3.60 3.256±2.82 9.716±1.27 5.802±1.29 7.502±4.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073B CIL_00073B_0001 CGP 20:59025467-59042909
CIL_000738 CIL_000738_0001 CGP 20:59033145-59259113

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005758 IBA mitochondrial intermembrane space
GO:0015914 IBA phospholipid transport
GO:1990050 IBA phosphatidic acid transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016401 Slmo2-001 protein_coding Mus_musculus 0 701
ENSMUST00000147944 Slmo2-002 retained_intron Mus_musculus 0 289
ENSMUST00000141100 Slmo2-003 protein_coding Mus_musculus 2e-33 148
ENSMUST00000117442 Slmo2-004 protein_coding Mus_musculus 0.0000000001 73
ENSMUST00000120822 Slmo2-005 protein_coding Mus_musculus 0.0000000005 71

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