C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017900 Slc12a7-201 ENSMUSG00000017756 10090 + 13:73763697-73816743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017900 19.980±2.81 20.530±1.64 39.314±0.71 5.706±3.56 23.508±8.62 44.635±7.31 51.864±11.92 37.254±3.75 19.739±11.76 20.096±6.38 1.358±0.42 74.483±11.63 28.553±5.45 5.774±2.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006884 IEA cell volume homeostasis
GO:0015379 IEA potassium:chloride symporter activity
GO:0016021 IEA integral component of membrane
GO:0019901 IEA protein kinase binding
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000134251 slc12a7b-001 protein_coding Danio_rerio 0 1014
ENSDART00000089232 slc12a7b-201 protein_coding Danio_rerio 0 950
ENSDART00000005053 slc12a4-201 protein_coding Danio_rerio 0 534
ENST00000264930 SLC12A7-001 protein_coding Homo_sapiens 0 3286
ENST00000316341 SLC12A4-001 protein_coding Homo_sapiens 6e-36 158
ENST00000422611 SLC12A4-201 protein_coding Homo_sapiens 6e-36 158
ENST00000504576 SLC12A7-006 retained_intron Homo_sapiens 0 276
ENST00000513223 SLC12A7-007 protein_coding Homo_sapiens 0 1022
ENST00000514994 SLC12A7-008 retained_intron Homo_sapiens 0 289
ENST00000537830 SLC12A4-005 protein_coding Homo_sapiens 5e-36 158
ENST00000541864 SLC12A4-004 protein_coding Homo_sapiens 5e-36 158
ENST00000570616 SLC12A4-020 nonsense_mediated_decay Homo_sapiens 3e-34 148
ENST00000570802 SLC12A4-018 retained_intron Homo_sapiens 3e-33 148
ENST00000572037 SLC12A4-007 protein_coding Homo_sapiens 5e-36 158
ENST00000611005 SLC12A7-201 protein_coding Homo_sapiens 0 3275

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