C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 2, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018875 Ap2b1-001 ENSMUSG00000035152 10090 + 11:83302483-83405035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018875
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018875 20.616±2.55 16.417±0.00 19.424±1.47 42.167±21.37 14.373±0.38 17.835±0.71 7.747±0.93 11.063±4.31 7.246±2.66 15.978±6.76 3.025±1.43 17.629±6.42 12.892±6.54 23.823±4.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JS CIL_0003JS_0002 CGP 11:83275110-83302586
CIL_0003JV CIL_0003JV_0002 CGP 11:83294642-83405035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0008565 IEA protein transporter activity
GO:0016020 IEA membrane
GO:0030131 IEA clathrin adaptor complex
GO:0030276 IEA clathrin binding
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000441083 RP11-97C18.1-001 processed_pseudogene Homo_sapiens 0 793
ENST00000441188 RP13-88F20.1-001 processed_pseudogene Homo_sapiens 0 2375
ENST00000587805 AP2B1-018 protein_coding Homo_sapiens 0 429
ENST00000588093 AP2B1-012 processed_transcript Homo_sapiens 0 241
ENST00000588116 AP2B1-017 nonsense_mediated_decay Homo_sapiens 0 630
ENST00000589774 AP2B1-009 protein_coding Homo_sapiens 0 671
ENST00000590432 AP2B1-010 protein_coding Homo_sapiens 0 355
ENST00000590538 AP2B1-014 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000591561 AP2B1-016 processed_transcript Homo_sapiens 0 802
ENST00000591610 AP2B1-013 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000592167 AP2B1-015 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000593014 AP2B1-011 protein_coding Homo_sapiens 0 592
ENST00000610402 AP2B1-022 protein_coding Homo_sapiens 0 4253
ENST00000612035 AP2B1-005 protein_coding Homo_sapiens 0 2972
ENST00000612116 AP2B1-006 protein_coding Homo_sapiens 0 2876
ENST00000614600 AP2B1-007 protein_coding Homo_sapiens 0 2876
ENST00000616681 AP2B1-021 protein_coding Homo_sapiens 0 3753
ENST00000616784 AP2B1-001 protein_coding Homo_sapiens 0 3018
ENST00000618940 AP2B1-201 protein_coding Homo_sapiens 0 4325
ENST00000619183 AP2B1-008 processed_transcript Homo_sapiens 0 2093
ENST00000620039 AP2B1-020 nonsense_mediated_decay Homo_sapiens 0 2566
ENST00000621668 AP2B1-004 protein_coding Homo_sapiens 0 2303
ENST00000621914 AP2B1-019 protein_coding Homo_sapiens 0 2968

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