C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fragile X mental retardation, autosomal homolog 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018909 Fxr2-006 ENSMUSG00000018765 10090 + 11:69632990-69653297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018909 19.746±3.37 29.558±3.28 48.067±15.72 38.518±9.08 19.395±6.14 19.986±1.49 23.128±3.14 16.189±3.89 13.080±3.85 20.992±4.19 42.062±1.50 29.692±6.00 29.015±7.97 14.955±7.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250113 FXR2-001 protein_coding Homo_sapiens 0 4012
ENST00000571079 FXR2-007 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000571597 FXR2-002 protein_coding Homo_sapiens 0 497
ENST00000573057 FXR2-006 processed_transcript Homo_sapiens 0 691
ENST00000573957 FXR2-004 retained_intron Homo_sapiens 0 383
ENST00000574490 FXR2-005 retained_intron Homo_sapiens 0 340
ENST00000576693 FXR2-003 retained_intron Homo_sapiens 0 457

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