C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline, glutamic acid and leucine rich protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019065 Pelp1-001 ENSMUSG00000018921 10090 - 11:70392883-70410028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019065 9.776±1.17 10.816±1.46 6.115±0.55 12.154±1.23 7.759±2.05 6.483±1.11 4.176±0.66 4.891±0.35 5.847±3.19 7.273±0.58 5.290±0.54 14.924±2.81 15.941±10.38 21.501±9.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RX CIL_0001RX_0002 CGP 11:70344152-70410031
CIL_0001PS CIL_0001PS_0002 CGP 11:70392883-70440828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016020 IEA membrane
GO:0035327 ISS transcriptionally active chromatin
GO:0044822 IEA poly(A) RNA binding
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0071339 ISS MLL1 complex
GO:0071391 ISS cellular response to estrogen stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301396 PELP1-201 protein_coding Homo_sapiens 0 3358
ENST00000436683 PELP1-202 protein_coding Homo_sapiens 0 2449
ENST00000572293 PELP1-001 protein_coding Homo_sapiens 0 3358
ENST00000573523 PELP1-004 retained_intron Homo_sapiens 0 2226
ENST00000574876 PELP1-015 protein_coding Homo_sapiens 0 3358
ENST00000575329 PELP1-003 nonsense_mediated_decay Homo_sapiens 0 2449
ENST00000575534 PELP1-013 retained_intron Homo_sapiens 0 311

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