C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dishevelled 2, dsh homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019362 Dvl2-001 ENSMUSG00000020888 10090 + 11:70000595-70010111 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000019362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000019362 7.469±0.05 6.457±0.62 5.865±0.00 8.575±2.41 8.726±0.30 5.236±0.58 4.029±0.14 5.936±0.24 10.325±1.03 7.404±1.47 5.665±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZV CIL_0002ZV_0002 CGP 11:70000595-70015411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0003007 IGI heart morphogenesis
GO:0003151 IMP outflow tract morphogenesis
GO:0005109 IBA frizzled binding
GO:0005515 IPI protein binding
GO:0005634 IMP nucleus
GO:0005737 ISO cytoplasm
GO:0005829 IDA cytosol
GO:0005856 NAS cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005938 IBA cell cortex
GO:0007379 IMP segment specification
GO:0007507 IMP heart development
GO:0016055 NAS Wnt signaling pathway
GO:0019904 IPI protein domain specific binding
GO:0021535 IBA cell migration in hindbrain
GO:0022007 IGI convergent extension involved in neural plate elongation
GO:0030136 IDA clathrin-coated vesicle
GO:0031410 ISO cytoplasmic vesicle
GO:0034613 IDA cellular protein localization
GO:0035282 IGI segmentation
GO:0035556 IEA intracellular signal transduction
GO:0042802 IPI identical protein binding
GO:0043507 IDA positive regulation of JUN kinase activity
GO:0043621 IDA protein self-association
GO:0045177 IDA apical part of cell
GO:0045893 IBA positive regulation of transcription, DNA-templated
GO:0046328 IBA regulation of JNK cascade
GO:0060029 IGI convergent extension involved in organogenesis
GO:0060070 IGI canonical Wnt signaling pathway
GO:0060071 IGI Wnt signaling pathway, planar cell polarity pathway
GO:0061098 IGI positive regulation of protein tyrosine kinase activity
GO:0090103 IGI cochlea morphogenesis
GO:0090179 IGI planar cell polarity pathway involved in neural tube closure
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000012450 dvl2-201 protein_coding Danio_rerio 4e-21 108
ENSDART00000135316 dvl2-001 protein_coding Danio_rerio 4e-21 108
ENST00000005340 DVL2-001 protein_coding Homo_sapiens 0 2942
ENST00000571745 DVL2-017 retained_intron Homo_sapiens 0 291
ENST00000572285 DVL2-003 retained_intron Homo_sapiens 0 582
ENST00000574143 DVL2-010 protein_coding Homo_sapiens 0 966
ENST00000574642 DVL2-007 processed_transcript Homo_sapiens 0 640
ENST00000575086 DVL2-016 protein_coding Homo_sapiens 0 933
ENST00000575458 DVL2-004 protein_coding Homo_sapiens 0 2737
ENST00000575756 DVL2-008 protein_coding Homo_sapiens 0 1323
ENST00000576285 DVL2-015 retained_intron Homo_sapiens 0 409
ENST00000576439 DVL2-011 retained_intron Homo_sapiens 0 627
ENST00000576840 DVL2-018 retained_intron Homo_sapiens 0 590
ENST00000576949 DVL2-009 retained_intron Homo_sapiens 0 470

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