C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desmoglein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019426 Dsg4-001 ENSMUSG00000001804 10090 + 18:20436175-20471821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverMusclePlacentaENSMUST00000019426
Transcript ID Bladder Breast Colon Heart Liver Muscle Placenta
ENSMUST00000019426 0.027±0.00 0.011±0.00 0.060±0.03 0.016±0.00 0.008±0.00 0.071±0.00 0.160±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EL CIL_0006EL_0002 CGP 18:20376729-20471821
CIL_0006PJ CIL_0006PJ_0002 CGP 18:20436175-20541310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IDA hair follicle development
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0016337 IMP single organismal cell-cell adhesion
GO:0030057 IMP desmosome
GO:0030216 IMP keratinocyte differentiation
GO:0030509 IDA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308128 DSG4-001 protein_coding Homo_sapiens 0 2787
ENST00000359747 DSG4-002 protein_coding Homo_sapiens 0 1864

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