C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: intercellular adhesion molecule 5, telencephalin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019616 Icam5-201 ENSMUSG00000032174 10090 + 9:21032038-21039036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000019616
Transcript ID Brain Testis
ENSMUST00000019616 36.084±35.64 1.382±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GD CIL_0004GD_0002 CGP 9:21029373-21039036
CIL_0004GL CIL_0004GL_0002 CGP 9:21032038-21067093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006909 IDA phagocytosis
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221980 ICAM5-001 protein_coding Homo_sapiens 0 2431
ENST00000586004 ICAM5-005 processed_transcript Homo_sapiens 0 556
ENST00000586480 ICAM5-002 retained_intron Homo_sapiens 0 1969
ENST00000587398 ICAM5-004 protein_coding Homo_sapiens 0 612

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