C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020174 Stx7-201 ENSMUSG00000019998 10090 + 10:24149317-24188959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020174 5.720±3.35 14.880±5.53 5.786±1.47 40.224±11.42 7.167±3.34 4.218±0.61 2.056±0.60 25.956±4.37 8.620±3.47 7.113±3.65 5.453±2.46 1.326±0.17 40.636±0.13 0.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QG CIL_0002QG_0002 CGP 10:24108488-24188959

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IBA SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005765 IEA lysosomal membrane
GO:0006886 IBA intracellular protein transport
GO:0016079 IBA synaptic vesicle exocytosis
GO:0031201 IBA SNARE complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367937 STX7-002 protein_coding Homo_sapiens 0 846
ENST00000367941 STX7-003 protein_coding Homo_sapiens 0 965
ENST00000448348 STX7-001 processed_transcript Homo_sapiens 0 601
ENST00000475879 STX7-004 retained_intron Homo_sapiens 9.99995e-41 171

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