C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367937 STX7-002 ENSG00000079950 9606 - 6:132461714-132513198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367937
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367937 11.224±0.00 6.429±0.00 4.465±0.00 10.891±4.21 15.960±0.00 8.949±3.54 3.051±0.00 12.144±0.00 4.730±2.58 6.841±1.11 4.813±0.00 16.960±4.37 8.712±0.92 5.467±2.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EB CIL_0001EB_0002 CGP 6:132445867-132539336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IBA SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005515 IEA protein binding
GO:0005765 IDA lysosomal membrane
GO:0005768 IEA endosome
GO:0006886 IBA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016079 IBA synaptic vesicle exocytosis
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IBA SNARE complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020174 Stx7-201 protein_coding Mus_musculus 0 846

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