C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: netrin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020204 Ntn4-001 ENSMUSG00000020019 10090 + 10:93641049-93747207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020204 3.760±1.67 7.769±1.11 2.782±0.20 2.209±0.02 5.963±1.23 5.748±0.96 2.249±0.99 18.447±2.36 1.253±0.79 31.304±4.27 1.192±0.40 13.912±1.03 1.004±0.97 1.378±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005604 ISS basement membrane
GO:0005886 TAS plasma membrane
GO:0016322 IDA neuron remodeling
GO:0043237 IDA laminin-1 binding
GO:0060668 IDA regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343702 NTN4-001 protein_coding Homo_sapiens 0 2021
ENST00000344911 NTN4-003 protein_coding Homo_sapiens 0 1932
ENST00000538383 NTN4-002 protein_coding Homo_sapiens 0 1893
ENST00000547980 NTN4-005 protein_coding Homo_sapiens 0 673
ENST00000552603 NTN4-007 processed_transcript Homo_sapiens 0 363
ENST00000553059 NTN4-004 protein_coding Homo_sapiens 0 1587

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